ANEXO II DEPARTAMENTO DE BIOQUÍMICA VEGETAL Y...

VI PLAN PROPIO DE INVESTIGACIÓN Y TRANSFERENCIA DE LA UNIVERSIDAD DE SEVILLA

ÁMBITO TEMPORAL DE APLICACIÓN: 2017 – 2020 Formulario para Presentación Telemática

VICERRECTORADO DE INVESTIGACIÓN DE LA UNIVERSIDAD DE SEVILLA 1

ANEXO II

DEPARTAMENTO DE BIOQUÍMICA VEGETAL Y BIOLOGÍA MOLECULAR

2018

Publicaciones 61

Índice de Impacto Acumulado (JCR) 270

1

NsrR1, a nitrogen stress-repressed sRNA, contributes to the regulation of nblA in Nostoc sp. PCC 7120

Álvarez-Escribano I, Vioque A, Muro-Pastor AM

Frontiers Microbiol 9: 450. doi:10.3389/fmicb.2018.02267.s001.

Índice de impacto: 4,019 (2017)

Cuartil Q2, Microbiology

2

ß-Cyanoalanine Synthase Action in Root Hair Elongation is Exerted at Early Steps of the Root Hair

Elongation Pathway and is Independent of Direct Cyanide Inactivation of NADPH Oxidase

Arenas-Alfonseca, L., Gotor, C., Romero, L.C., Garcia, I.

Plant Cell Physiol 59: 1072-1083.

Índice de impacto: 4,059

Cuartil D1/Q1, Plant Science

3

Role of mitochondrial cyanide detoxification in Arabidopsis root hair development

Arenas-Alfonseca, L., Gotor, C., Romero, L.C., Garcia, I.

Plant Signal Behav: 1-3.

No tiene indice de impacto

4

Hydrogen Sulfide Signaling in Plants: Emerging Roles of Protein Persulfidation.

Aroca, A., Gotor, C., Romero, L.C.

Front Plant Sci 9: 1369.

Índice de Impacto: 4,298


5

Upstream kinases of plant SnRKs are involved in salt stress tolerance

Barajas-Lopez J.D., Moreno J.R., Gámez-Arjona F.M., Pardo J.M., Punkkinen M., Zhu J.K., Quintero

F.J., Fujii H.

Plant J 93: 107-118.






6

Autophagy is activated and involved in cell death with participation of cathepsins during stress-induced

microspore embryogenesis in barley

Bárány I, Berenguer E, Solís MT, Pérez-Pérez Y, Santamaría ME, Crespo JL, Risueño MC, Díaz I,

Testillano PS

J Exp Bot 69: 1387-1402.



7

The singular properties of photosynthetic cytochrome c550 from the diatom Phaeodactylum tricornutum

suggest new alternative functions.

Bernal-Bayard P, Álvarez C, Calvo P, Castell C, Roncel M, Hervás M, Navarro JA

Physiol Plant (aceptado).

Índice de impacto: 2.58

Cuartil Q1, Plant Science

8

The distinctive regulation of cyanobacterial glutamine synthetase.

Bolay P, Muro-Pastor MI, Florencio FJ, Klähn S.

Life (Basel) Oct 27;8(4). pii: E52. doi: 10.3390/life8040052.

Cite Score Scopus, 3.24

Cuartil Q1, General Biochemistry, Genetics and Molecular Biology 37/187

9

Homospermidine biosynthesis in the cyanobacterium Anabaena requires a deoxyhypusine synthase

Burnat M, Li B, Kim SH, Michael AJ, Flores E

Mol. Microbiol 109: 763-780.



10

The Cyanobacterial Ribosomal-Associated Protein LrtA from Synechocystis sp. PCC 6803 Is an

Oligomeric Protein in Solution with Chameleonic Sequence Properties

Contreras LM, Sevilla P, Cámara-Artigas A, Hernández-Cifre JG, Rizzuti B, Florencio FJ, Muro-Pastor

MI, García de la Torre J, Neira JL

Int J Mol Sci. Jun 24;19(7). pii: E1857. doi: 10.3390/ijms19071857.


Cuartil Q2, Biochemistry and Molecular biology. 90 de 293.

11

FtsZ of filamentous heterocyst-forming cyanobacteria has a conserved N-terminal peptide required for

normal FtsZ polymerization and cell division

Corrales-Guerrero L, Camargo S, Valladares A, Picossi S, Luque I, Ochoa de Alda JAG, Herrero A

Front Microbiol 9: 2260.






12

Autophagic flux is required for the synthesis of triacylglycerols and ribosomal protein turnover in

Chlamydomonas

Couso I, Pérez-Pérez ME, Martínez-Force E, Kim HS, He Y, Umen JG, Crespo J

J Exp Bot 69: 1355-1367.



13

Birth of a Photosynthetic Chassis: A MoClo Toolkit Enabling Synthetic Biology in the Microalga

Chlamydomonas reinhardtii

Crozet P, Navarro FJ, Willmund F, Mehrshahi P, Bakowski K, Lauersen KJ, Pérez-Pérez ME, Auroy P,

Gorchs Rovira A, Sauret-Gueto S, Niemeyer J, Spaniol B, Theis J, Trösch R, Westrich LD, Vavitsas K,

Baier T, Hübner W, de Carpentier F, Cassarini M, Danon A, Henri J, Marchand CH, de Mia M,

Sarkissian K, Baulcombe DC, Peltier G, Crespo JL, Kruse O, Jensen PE, Schroda M, Smith AG,

Lemaire SD

ACS Synth Biol 7: 2074-2086.


Cuartil D1/Q1, Biochemical Research Methods

14

Epigenetic features of human telomeres

Cubiles M, Barroso S, Vaquero-Sedas M, Enguix A, Aguilera A, Vega-Palas M

Nucleic Acids Res 46: 2347–2355.


Cuartil D1/Q1, Bioquímica y Biología Molecular 10/293 (Percentil 96)

15

Pleiotropic effects of enhancing vacuolar K+/H+ exchange in tomato

de Luca A., Pardo J.M., Leidi E.O

Physiol Plant 163: 88-102.



16

How do Mediterranean shrub species cope with shade? Ecophysiological response to different light

intensities

Díaz-Barradas MC, Zunzunegui M, Alvarez-Cansino L, Esquivias MP, Valera J, Rodríguez H

Plant Biology 20: 296-306.






17

Markers of developmentally-regulated PCD and their analysis in cereal seeds

Domínguez F, Cejudo FJ

Meth Mol Biol 1743: 21-37.

Transcriptional regulation of development in heterocyst-forming cyanobacteria

Flores E, Picossi S, Valladares A, Herrero A

Biochim Biophys Acta - Gene Regulatory Mechanisms (in press) (doi: 10.1016/j.bbagrm.2018.04.006).


Cuartil D1/Q1, Biochemistry and Molecular Biology

18

HCN regulates cellular processes through posttranslational modification of proteins by S-cyanylation.

García I, Arenas-Alfonseca L, Moreno I, Gotor C, Romero LC

Plant Physiol. (en prensa)



19

The afterglow thermoluminescence band as an indicator of changes in the photorespiratory metabolism

in the model legume Lotus japonicus.

García-Calderón, M, Betti, M, Márquez, AJ, Ortega, JM, Roncel M

Physiol Plant (aceptado).



20

How to combine CO2 abatement and starch production in Chlorella vulgaris

García-Cubero R, Moreno J, Acién-Fernández FG, García-González M

Algal Research 32: 270-279.


Cuartil D1/Q1, Agronomy and Crop Science (puesto 6 de 309)

21

Potential of Chlorella vulgaris to abate flue gas

García-Cubero R., Moreno J., García-González M.

Waste Biomass Valor 9, 11: 2015-2019


Cuartil Q3, Environmental Sciences (puesto 132 de 242)

22

Chloroplast damage induced by the inhibition of fatty acid synthesis triggers autophagy in

Chlamydomonas

Heredia-Martínez LG, Andrés-Garrido A, Martínez-Force E, Pérez-Pérez ME, Crespo JL

Plant Physiol. pii: pp.00630.2018. doi: 10.1104/pp.18.00630.






23

Genetic responses to carbon and nitrogen availability in Anabaena

Herrero A, Flores E

Env Microbiol doi:10.1111/1462-2920.14370.


Cuartil D1/Q1, Microbiology

24

CRISPR-Cas systems in multicellular cyanobacteria.. Hou S, Brenes-Álvarez M, Reimann V,

Alkhnbashi OS, Backofen R, Muro-Pastor AM, Hess WR

RNA Biol. doi: 10.1080/15476286.2018.1493330 [Epub ahead of print].


Cuartil D1/Q1, Microbiology

25

Paving the way for the production of secretory proteins by yeast cell factories.

Huertas MJ, Michan C

Microbial Biotechnology. (en prensa).


Cuartil Q1, Biotechnology & Applied Biotechnology 33/161

26

Interaction of 2',3'-cAMP with Rbp47b plays a role in stress granule formation

Kosmacz M, Luzarowski M, Kerber O, Leniak E, Gutierrez-Beltran E, Moreno Beltran JC, Gorka M,

Szlachetko J, Veyel D, Graf A, Skirycz A

Plant Physiol 177: 411-421.



27

Characterization of TrxC an atypical thioredoxin exclusively present in cyanobacteria

López Maury L, Heredia-Martínez L, Florencio FJ

Antioxidants 7: 164. doi:10.3390/antiox7110164.

Cite Score Scopus, 3.56

Cuartil Q1, Biochemistry 92/402

28

Multiple ABC glucoside transporters mediate sugar-stimulated growth in the heterocyst-forming

cyanobacterium Anabaena sp. strain PCC 7120

Nieves-Morión M, Flores E

Environ Microbiol Rep 10: 40-48.


Cuartil Q2, Microbiollogy

http://onlinelibrary.wiley.com/doi/10.1111/1758-2229.12603/full

http://onlinelibrary.wiley.com/doi/10.1111/1758-2229.12603/full




29

The NADPH-dependent thioredoxin reductase C-2-Cys peroxiredoxin redox system modulates the

activity of thioredoxin x in Arabidopsis chloroplasts

Ojeda V, Pérez-Ruiz JM, Cejudo FJ

Plant Cell Physiol 59: 2155-2164.



30

2-Cys peroxiredoxins participate in the oxidation of chloroplast enzymes in the dark

Ojeda V, Pérez-Ruiz JM, Cejudo FJ

Mol. Plant 11: 1377-1388.



31

The control of chlorophyll biosynthesis mainly depends on thioredoxins.

Richter A, Pérez-Ruiz JM, Cejudo FJ, Grimm B

FEBS Lett 592: 3111-3115.



32

Park J, Lim CJ, Shen M, Park HJ, Cha J-Y, Iniesto E, Rubio V, Mengiste T, Zhu J-K, Bressan RA, Lee

SY, Lee B-H, Jin JB, Pardo JM, Kim W-Y, Yun DJ (2018) Epigenetic switch from repressive to

permissive chromatin in response to cold stress.

Proc. Natl. Acad. Sci. USA. 115: E5400-E5409.


Cuartil D1/Q1, Multidisciplinary

33

The ancient phosphatidylinositol 3-kinase signaling system is a master regulator of energy and carbon

metabolism in algae

Ramanan R, Tran QG, Cho DH, Jung JE, Kim BH, Shin SY, Choi SH, Liu KH, Kim DS, Lee SJ,

Crespo JL, Lee HG, Oh HM, Kim HS

Plant Physiol. 177: 1050-1065.



34

Specific mutations in the permease domain of septal protein SepJ differentially affect functions related

to multicellularity in the filamentous cyanobacterium Anabaena

Ramos-León F, Arévalo S, Mariscal V, Flores E

Microbial Cell 5: 555-565.

Revista nueva sin índice de impacto aún

https://www.ncbi.nlm.nih.gov/pubmed/30292682




35

Mechanisms for protein redistribution in thylakoids of Anabaena during cell differentiation. Plant Cell

Santamaría-Gómez J, Mariscal V, Luque I

Plant Cell Physiol (2018) doi: 10.1093/pcp/pcy103.



36

Virus-induced gene silencing database for phenomics and functional genomics in Nicotiana

benthamiana

Senthil-Kumar M, Wang M, Chang J, Ramegowda V, del Pozo O, Yule Liu, Doraiswamy V, Lee H-K,.

Ryu C-M, Wang K, Xu P, Van Eck J, Chakravarthy S, Dinesh-Kumar SP, Martin GB, Mysore KS

Plant Direct 2: 1-9. doi: 10.1002/pld3.55

Revista nueva sin índice de impacto aún

37

Cytochrome c6 is the main respiratory and photosynthetic soluble electron donor in heterocysts of the

cyanobacterium Anabaena sp. PCC 7120

Torrado A, Ramírez-Moncayo C, Navarro JA, Mariscal V, Molina-Heredia FP

Biochim Biophys Acta, Bioenerg, en prensa.


Cuartil D1/Q1, Biochemistry and Molecular Biology

38

Glucose-nucleobase pairs within DNA: impact of hydrophobicity, alternative linking unit and DNA

polymerase nucleotide insertion studies.

Vengut-Climent E, Peñalver P, Lucas R, Gómez-Pinto I, Aviñó A, Muro-Pastor AM, Galbis E, de Paz

MV, Fonseca Guerra C, Bickelhaupt FM, Eritja R, González C, Morales JC

Chem Sci 9: 3544-3554


Cuartil D1/Q1, Chemistry, multidisciplinary

39

Investigating the effect of target of rapamycin kinase inhibition on the Chlamydomonas reinhardtii

phosphoproteome: from known homologs to new targets.

Werth EG, McConnell EW, Couso Lianez I, Perrine Z, Crespo JL, Umen JG, Hicks LM

New Phytol. doi: 10.1111/nph.15339.



40

Arabidopsis transporters KEA4, KEA5 and KEA6 mediate pH and potassium homeostasis in

endomembrane compartments

Zhu X., Pan T., Zhang H., Fan L., Quintero F.J., Zhao H., Su X., Li, X., Villalta I., Mendoza I., Shen J.,

Jiang L., Pardo J.M., Qiu Q-S

Plant Physiol, early print (DOI:10.1104/pp.18.01053).



https://doi.org/10.1104/pp.18.01053




41

Yra1-bound RNA–DNA hybrids cause orientation-independent transcription–replication collisions and

telomere instability

García-Rubio M, Aguilera P, Lafuente-Barquero J, Ruiz JF, Simon MN, Geli V, Rondón AG and

Aguilera A

Genes and Development, 32, 965-977. doi:10.1101/gad.311274.117.


Cuartil D1/Q1, Genetics and Heredity

42

SUMOylation regulates LKB1 localization and its oncogenic activity in liver cáncer

Imanol Zubiete-Franco, Juan L. García-Rodríguez, Fernando Lopitz-Otsoa, Marina Serrano-Macia,

Jorge Simon, Pablo Fernández-Tussy, Lucía Barbier-Torres, David Fernández-Ramos, Virginia

Gutiérrez-de-Juan, Sergio López de Davalillo, Onintza Carlevaris, Adolfo Beguiristain Gómez, Erica

Villa, Diego Calvisi, César Martín, Edurne Berra, Patricia Aspichueta, Naiara Beraza, Marta Varela-

Rey, Matias Ávila, Manuel S. Rodríguez, José M. Mato, Irene Díaz-Moreno, Antonio Díaz-Quintana,

Teresa C. Delgado, María L. Martínez-Chantar

EBioMedicine, DOI: 10.1016/j.ebiom.2018.12.031


Cuartil D1/Q1, Research and Experimental Science

43

Long distance electron transfer through the aqueous solution between redox partner proteins

Lagunas A, Guerra-Castellano A, Nin-Hill A, Díaz-Moreno I, De la Rosa MA, Samitier J, Rovira C,

Gorostiza P.

Nature Communications 5157, doi: 10.1038/s41467-018-07499-x


Cuartil D1/Q1, Multidisciplinary Sciemces

44

HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs

Pabis M, Popowicz GM, Stehle R, Fernández-Ramos D, Asami S, Warner L, García-Mauriño SM,

Schlundt A, Martínez-Chantar ML, Díaz-Moreno I, Sattler M.

Nucleic Acids Research 10.1093/nar/gky1138


Cuartil D1/Q1, Bioquímica y Biología Molecular 10/293 (Percentil 96)

45

Pantothenate Rescues Iron Accumulation in Pantothenate Kinase-Associated Neurodegeneration

Depending on the Type of Mutation

Autores: Mónica Álvarez-Córdoba, Aida Fernández Khoury, Marina Villanueva-Paz, Carmen Gómez-

Navarro, Irene Villalón-García, Juan M.Suárez-Rivero, Suleva Povea-Cabello, Mario de la Mata, David

Cotán, Marta Talaverón-Rey, Antonio J. Pérez-Pulido, Joaquín J. Salas, Eva Mª Pérez-Villegas,

Antonio Díaz-Quintana, José A. Armengol, José A. Sánchez-Alcázar

Molecular Neurobiology, DOI: /10.1007/s12035-018-1333-0


Cuartil Q1, Neurosciences




46

Protein crosslinking improves the thermal resistance of plastocyanin immobilized on a modified gold

electrode

Autores: Olloqui-Sariego JL, Díaz-Quintana A, De la Rosa MÁ, Calvente JJ, Márquez I, Díaz-Moreno

I, Andreu R.

Bioelectrochemistry 127-132, DOI: 10.1016/j.bioelechem.2018.07.013.


Cuartil D1/Q1, Biophysics

47

Oxidative stress is tightly regulated by cytochrome c phosphorylation and respirasome factors in

mitochondria

Alejandra Guerra-Castellano, Antonio Díaz-Quintana, Gonzalo Pérez-Mejías, Carlos A. Elena-Real,

Katiuska González-Arzola, Sofía M. García-Mauriño, Miguel A. De la Rosa, and Irene Díaz-Moreno

Proc. Natl. Acad. Sci. U.S.A. https://doi.org/10.1073/pnas.1806833115


Cuartil D1/Q1, Multidisciplinary

48

Cytochrome c speeds up caspase cascade activation by blocking 14-3-3ε-dependent Apaf-1 inhibition

Carlos A. Elena-Real, Antonio Díaz-Quintana1, Katiuska González-Arzola, Adrián Velázquez-Campoy,

Mar Orzáez, Abelardo López-Rivas, Sergio Gil-Caballero, Miguel A. De la Rosa and Irene Díaz-

Moreno

Cell Death and Disease, doi:10.1038/s41419-018-0408-1


Cuartil D1/Q1, Cell Biology

49

Nuclear Cytochrome c: A Mitochondrial Visitor Regulating Damaged Chromatin Dynamics

Díaz-Moreno I., Velázquez-Cruz A., Curran-French S., Díaz-Quintana A. and De la Rosa M.A.

FEBS Letters, DOI: 10.1002/1873-3468.12959.



50

Targeted Quantification of Isoforms of a Thylakoid-Bound Protein: MRM Method Development BT

Bru-Martínez R, Martínez-Márquez A, Morante-Carriel J, Sellés-Marchart S, Martínez-Esteso, M. J.,

Pineda-Lucas, J. L., & Luque, I. (2018)- Plant Membrane Proteomics: Methods and Protocols. In H.-P.

Mock, A. Matros, & K. Witzel (Eds.) (pp. 147–162). New York, NY: Springer New York.

https://doi.org/10.1007/978-1-4939-7411-5_10.

51

Hongos entomopatógenos: de la agricultura a la conservación del patrimonio histórico

Crespo Martín E, Gallego Sánchez LM, Gámez Arcas S, Mozo Mulero M, Nevado Berzosa MP, Pérez

Camacho I, Soriano Bermúdez JJ, Téllez Pueblas EA, Molina-Heredia FP, Roncel M, Pérez-Castiñeira

JR (2018). Revista PH 94:352-367.

https://doi.org/10.1007/978-1-4939-7411-5_10




52

Características epigenéticas de los telómeros humanos

Cubiles M, Barroso S, Enguix A, Vaquero-Sedas M, Aguilera A, Vega-Palas M (2018)

Revista de la Sociedad Española de Bioquímica y Biología Molecular nº 196.

53

Nitrogen assimilation in bacteria

Herrero A, Flores E, Imperial J (2018). In: Encyclopedia of Microbiology 4th edition, Microbial

Physiology and Genetics (eds.: R. Haselkorn & B. Brahamsha). Elsevier (in press).

54

Peroxisome dynamics and regulation by ROS and pexophagy in response to Cd stress

Nieves C, Fernández-Alejandro M, Rodriguez-Serrano M, Laureano-Marin AM, Exposito M,

Mullineaux P, Gotor C, Romero-Puertas MC, Olmedilla A, Sandalio LM (2018). Free Radical Biology

and Medicine 120: S117.

55

Presentación a Matei Chihaia

Serrano A (2018). En: Ciencia, Innovación y Cultura, los Tres Pilares del Conocimiento (Documentos

Humboldt 17), pp. 65-66, Madrid (ISBN 978-84-8187-267-5).

56

On the elaborate thioredoxin network in higher plants

Thormählen I, Naranjo B, Trujillo-Hernández JA, Reichheld J-P, Cejudo FJ, Geigenberger P (2018).

En: Progress in Botany, Springer, Berlin, Heidelberg. DOIhttps://doi.org/10.1007/124_2018_16.

57

Evolution of gene regulatory networks in plant development

Valverde F, Groover, A, Romero, JM (2018). (eds.s Frontiers Media SA) (ISBN: 978-2-88945-407-5).

58

NUMB and NUMBL differences in gene regulation.

José M. García-Heredia, Amancio Carnero.

Oncotarget 9(10): 9219–9234.


Cuartil Q1, Oncology: 44/217 (Q1)

59

Dr. Jekyll and Mr. Hyde: MAP17's up-regulation, a crosspoint in cancer and inflammatory diseases

José M. García-Heredia, Amancio Carnero.

Molecular Cancer 17, Issue 1, 12 April 2018

Índice de impacto 7.776

D1, Cuartil Q1, BIOCHEMISTRY & MOLECULAR BIOLOGY: 27/293 (Q1)




60

MAP17 predicts sensitivity to platinum-based therapy, EGFR inhibitors and the proteasome inhibitor

bortezomib in lung adenocarcinoma

Ferrer, I; Quintanal-Villalonga, A; Molina-Pinelo, S; Garcia-Heredia, JM; Perez, M (Perez, Marco);

Suarez, R; Ponce-Aix, S; Paz-Ares, L; Carnero, A.

JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH 37 Issue 1, 17


Cuartil Q1, ONCOLOGY: 34/223 Q1

61

Valverde, F., Groover, A., Romero, J. M., eds.

Evolution of Gene Regulatory Networks in Plant Development.

Lausanne: Frontiers Media. (2018)

DOI: 10.3389/978-2-88945-407-5

https://www.frontiersin.org/research-topics/4033/evolution-of-gene-regulatory-networks-in-plant-

development



https://www.frontiersin.org/research-topics/4033/evolution-of-gene-regulatory-networks-in-plant-development






CUADRO RESUMEN (número de aportaciones) LIBROS:

2014 2015 2016 2017 2018

Q1 en SPI

Q2 en SPI

Q3 en SPI

Q4 en SPI

Otros no SPI

TOTAL

CAPÍTULOS DE LIBROS:

2014 2015 2016 2017 2018

Q1 en SPI

Q2 en SPI

Q3 en SPI

Q4 en SPI

Otros no SPI

TOTAL 5 3 5 3 7

ARTÍCULOS CIENTÍFICOS DE REVISTAS (proceso anónimo de revisión por pares):

2014 2015 2016 2017 2018

Decil 1 JCR 21 21 20 32 32

Q1 JCR o SJR 19 17 19 12 12

Q2 JCR o SJR 12 9 9 2 6

Q3 JCR o SJR 2 4 2 7 1

Q4 JCR o SJR 2 0 0 1 0

Otros 4 3 2 6 4

TOTAL 60 54 52 60 55

ANEXO II DEPARTAMENTO DE BIOQUÍMICA VEGETAL Y...

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